The detailed information of tRNA gene sequence


Sequence ID>WENV180095625
Genome IDMTBK01078393
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 388
End posion on genome 313
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atatattttT
tRNA gene sequence 
GGGCGCGTAGCTCAGCTGGTTAGAGCGCACGGTTCACATCCGTGAGGTCGATGGTTCGAG
TCCATTCGCGCCCATtt
Downstream region at tRNA end position 
tggtttaagg
Secondary structure (Cloverleaf model)
>WENV180095625	Val	CAC
                   T      ATtt tggtttaagg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T G
                    T     T T A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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