The detailed information of tRNA gene sequence


Sequence ID>WENV180095633
Genome IDMTBK01078893
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 549
End posion on genome 475
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ccatgatttt
tRNA gene sequence 
GGGCCCATAGCTCAGCGGTAGAGCGACCGGCTCATAACCGGTTGGTCCCTGGTTCGAATC
CGGGTGGGCCCACCA
Downstream region at tRNA end position 
agcgtgtaag
Secondary structure (Cloverleaf model)
>WENV180095633	Ile2	CAT
                   t      ACCA agcgtgtaag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G G G C C     A
        G A        A      | | + | |     G
      C     C T C G       C C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     TGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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