The detailed information of tRNA gene sequence


Sequence ID>WENV180095637
Genome IDMTBK01079181
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 178
End posion on genome 263
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatacagaat
tRNA gene sequence 
GGAAAGGTGGCCGAGTGGACGATGGCGGAGGTCTTGAAAGCCTTATTACGAAAGTAACGC
AGGTTCGAATCCTGCCCTTTCCGCCA
Downstream region at tRNA end position 
atctttttat
Secondary structure (Cloverleaf model)
>WENV180095637	Ser	TGA
                   t      GCCA atctttttat
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C A G G     C
    G       + | | |                 T T
    A       T G G C
      C G A        G     ATTACGAAAGTAAC
                    G + T
                    A - T
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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