The detailed information of tRNA gene sequence


Sequence ID>WENV180095638
Genome IDMTBK01079330
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 772
End posion on genome 699
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atttctatat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAGT
CCTCCCTCCGCTACta
Downstream region at tRNA end position 
agaaaacaag
Secondary structure (Cloverleaf model)
>WENV180095638	fMet	CAT
                   t      ACta agaaaacaag
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C C T C C     A
      T G A        G      | | | | |     G
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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