The detailed information of tRNA gene sequence


Sequence ID>WENV180095642
Genome IDMTBK01079523
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 159
End posion on genome 233
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtgcgtgtat
tRNA gene sequence 
GGTGGGATAGCTCAGTAGGTTAGAGCATGGGATTCATAAACCCAAGGTCGGTGGTTCGAT
TCCACTTCCCACCACat
Downstream region at tRNA end position 
tcctaatatt
Secondary structure (Cloverleaf model)
>WENV180095642	Met	CAT
                   t      ACat tcctaatatt
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T T
                    T     T C A C C     A
      T G A        A      + | | | |     G
    A       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A   A
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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