The detailed information of tRNA gene sequence


Sequence ID>WENV180095646
Genome IDMTBK01079816
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 6363
End posion on genome 6287
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
taatttaata
tRNA gene sequence 
GGGTGATTAGCTCAGTTGGTTAGAGCGCTACGTTCACATCGTAGAGGCCACTGGTTCGAG
TCCAGTATCACCCACCA
Downstream region at tRNA end position 
taatcgtgtc
Secondary structure (Cloverleaf model)
>WENV180095646	Val	CAC
                   a      ACCA taatcgtgtc
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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