The detailed information of tRNA gene sequence


Sequence ID>WENV180095647
Genome IDMTBK01080071
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 31
End posion on genome 102
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tgtgtttaat
tRNA gene sequence 
GGCGTGGTAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTTATCAGCAGTTCGATTCT
GCTCCACGCCTCat
Downstream region at tRNA end position 
agatgccgcg
Secondary structure (Cloverleaf model)
>WENV180095647	Cys	GCA
                   t      TCat agatgccgcg
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C          T T
                    T     T C G T C     A
        G A        A      | | | | |     G
      T     A C C G       A G C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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