The detailed information of tRNA gene sequence


Sequence ID>WENV180095690
Genome IDMTBK01082903
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 6455
End posion on genome 6381
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ggcccgcgcc
tRNA gene sequence 
GGGCCGTTAGCTCAGTGGTCAGAGCAGGGGACTCATAATCCTTTGGTCGTTGGTTCGATC
CCAACACGGCCTACCg
Downstream region at tRNA end position 
ccggccttgc
Secondary structure (Cloverleaf model)
>WENV180095690	Ile2	CAT
                   c      ACCg ccggccttgc
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          C T
                    T     C A A C C     A
      T G A        A      | | | | |     G
    G       C T C G       G T T G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     TGGTC
                    G + T
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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