The detailed information of tRNA gene sequence


Sequence ID>WENV180095695
Genome IDMTBK01083292
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 945
End posion on genome 1031
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgcctgttt
tRNA gene sequence 
GGAGAGGTCGCATAGTTGGTCTAGTGCGCTCGCTTGGAAAGCGAGTATACCGAGAGGTAT
CAAGGGTTCGAATCCCTTCCTCTCCGCtg
Downstream region at tRNA end position 
aagaacccac
Secondary structure (Cloverleaf model)
>WENV180095695	Ser	GGA
                   t      GCtg aagaacccac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       A A G G G     C
  G         + | | |                 T T
  T         G T G C
    C T A          G     TATACCGAGAGGTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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