The detailed information of tRNA gene sequence


Sequence ID>WENV180095713
Genome IDMTBK01084276
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 305
End posion on genome 380
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aataaaaagt
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGGAACGTTCGCAATGTTCAGGTCAGGGGTTCAATT
CCCCTTAGCTCCACCA
Downstream region at tRNA end position 
atttaccttg
Secondary structure (Cloverleaf model)
>WENV180095713	Ala	CGC
                   t      ACCA atttaccttg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T T
                    T     T C C C C     A
      C G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    G - C
                    A - T
                    A - T
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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