The detailed information of tRNA gene sequence


Sequence ID>WENV180095719
Genome IDMTBK01084780
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 203
End posion on genome 129
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
accactcaat
tRNA gene sequence 
GGTGCGGTAGTTCAGCTGGTTAGAATATCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
TCCCGTCCGCACCGCaa
Downstream region at tRNA end position 
aaaagctctt
Secondary structure (Cloverleaf model)
>WENV180095719	Asp	GTC
                   t      GCaa aaaagctctt
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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