The detailed information of tRNA gene sequence


Sequence ID>WENV180095720
Genome IDMTBK01084826
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 505
End posion on genome 579
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agtggctcga
tRNA gene sequence 
GGCGGCATAGCCAAGTGGTAAGGCAGAGCTCTGCAAAAGCTCTATTCCCCGGTTCGAATC
TGGGTGCCGCCTCCA
Downstream region at tRNA end position 
tttttatnnn
Secondary structure (Cloverleaf model)
>WENV180095720	Cys	GCA
                   a      TCCA tttttatnnn
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        A      | | | + |     G
      T     A C C G       C C C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATTC
                    G - C
                    A - T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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