The detailed information of tRNA gene sequence


Sequence ID>WENV180095722
Genome IDMTBK01084876
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 983
End posion on genome 908
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tttatattaT
tRNA gene sequence 
CGCGGGATGGAGCAGTTCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCAAA
TCCTGCTCCCGCAATtg
Downstream region at tRNA end position 
ttgaattaga
Secondary structure (Cloverleaf model)
>WENV180095722	fMet	CAT
                   T      ATtg ttgaattaga
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
      T G A        G      | + | | |     A
    T       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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