The detailed information of tRNA gene sequence


Sequence ID>WENV180095726
Genome IDMTBK01084876
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 590
End posion on genome 501
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tattggtttT
tRNA gene sequence 
GGGGAAGTACTCAAGAGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGAGAAATCGG
CGCGAGGGTTCAAATCCCTCCTTCTCCGTat
Downstream region at tRNA end position 
tttttggtcc
Secondary structure (Cloverleaf model)
>WENV180095726	Ser	GCT
                   T      GTat tttttggtcc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGAGAAATCGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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