The detailed information of tRNA gene sequence


Sequence ID>WENV180095728
Genome IDMTBK01084994
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1203
End posion on genome 1130
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcgtcggccg
tRNA gene sequence 
AGGGCAGTAGCTCAATTGGTAGAGCAACGGTCTCCAAAACCGTAGGTTGGGGGTTCGAGT
CCCTCCTGCCCTGCag
Downstream region at tRNA end position 
cgcctcatcc
Secondary structure (Cloverleaf model)
>WENV180095728	Trp	CCA
                   g      GCag cgcctcatcc
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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