The detailed information of tRNA gene sequence


Sequence ID>WENV180095749
Genome IDMTBK01085979
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2447
End posion on genome 2375
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgggcctatt
tRNA gene sequence 
GCGGGATTCGTATAGTGGTAGTACGGAGGTCTCCAAAACCTTTAGCGGGGGTTCGATTCC
CTCATCCCGTGCCt
Downstream region at tRNA end position 
ggttattata
Secondary structure (Cloverleaf model)
>WENV180095749	Trp	CCA
                   t      GCCt ggttattata
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          T T
                    T     C T C C C     A
        G A        C      | + | | |     G
      T     T A T G       G G G G G     C
      G     + | | |                 T T
      G     G T A C
        T A        G     TAGC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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