The detailed information of tRNA gene sequence


Sequence ID>WENV180095771
Genome IDMTBK01087571
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2645
End posion on genome 2571
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
attaataaat
tRNA gene sequence 
GGGCCATTAGCTCAGTTGGCTAGAGCGCTTCCATGGCATGGAAGAGGCCAAGGGTTCAAG
TCCCTTATGGTCCACaa
Downstream region at tRNA end position 
tcctcgtttt
Secondary structure (Cloverleaf model)
>WENV180095771	Ala	GGC
                   t      ACaa tcctcgtttt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     T T C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A A G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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