The detailed information of tRNA gene sequence


Sequence ID>WENV180095777
Genome IDMTBK01088797
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1094
End posion on genome 1169
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtaagacatt
tRNA gene sequence 
GGTGACGTAGCCAAGTTGGTTAAGGCCGTGGTCTGCAAAACCACTATCATGGGTTCGAAT
CCCATCGTCACCTCCA
Downstream region at tRNA end position 
tatattgata
Secondary structure (Cloverleaf model)
>WENV180095777	Cys	GCA
                   t      TCCA tatattgata
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T A C C C     A
      T G A        A      | | | | |     G
    T       A C C G       A T G G G     C
    G         | | |                 T T
    G       A G G C
      T T A        C     TATC
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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