The detailed information of tRNA gene sequence


Sequence ID>WENV180095781
Genome IDMTBK01089165
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 457
End posion on genome 533
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cggaacgacc
tRNA gene sequence 
GGCCCCGTAGCTCAGCTGGATAGAGCAGCAGCCTTCTAAGCTGTTGGTTGCAGGTTCGAA
TCCTGCCGGGGTCGCCA
Downstream region at tRNA end position 
ggtcctccaa
Secondary structure (Cloverleaf model)
>WENV180095781	Arg	TCT
                   c      GCCA ggtcctccaa
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     TGGTT
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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