The detailed information of tRNA gene sequence


Sequence ID>WENV180095800
Genome IDMTBK01090262
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 94662
End posion on genome 94751
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgtttacaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTTGGTCGAAGGCGCGCGCCTGGAAAGTGCGTAAACTCCAAAAGGG
TTTCGTGGGTTCGAATCCCACTCTCTCCGCat
Downstream region at tRNA end position 
aatatatata
Secondary structure (Cloverleaf model)
>WENV180095800	Ser	GGA
                   a      GCat aatatatata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G T G G G     C
  G           | | |                 T T
  T         A G G C
    C G A          G     TAAACTCCAAAAGGGTTTC
                    C - G
                    G - C
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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