The detailed information of tRNA gene sequence


Sequence ID>WENV180095806
Genome IDMTBK01090738
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 486
End posion on genome 398
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttaaaaaagc
tRNA gene sequence 
GGAGAAATACTCAAGAGGCTGAAGAGGCGGGCTTGGAAAGCTCGTAGGGTGTAAAAGCCG
CGAGGGTTCAAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
aaatgtaaaa
Secondary structure (Cloverleaf model)
>WENV180095806	Ser	GGA
                   c      GCCA aaatgtaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGGTGTAAAAGCCGC
                    C - G
                    G - C
                    G + T
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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