The detailed information of tRNA gene sequence


Sequence ID>WENV180095807
Genome IDMTBK01090773
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 639
End posion on genome 552
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agccttgcac
tRNA gene sequence 
GGAGGGTTGTCCGAGTGGTCGATGGTGCGACTCTCGAAAAGTCGTGTTCCGACAGGAACC
TAGGGTTCGAATCCCTAACCCTCCGCCA
Downstream region at tRNA end position 
aaaacccgcg
Secondary structure (Cloverleaf model)
>WENV180095807	Ser	CGA
                   c      GCCA aaaacccgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     A T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       T A G G G     C
    G       + | |                   T T
    T       T G G T
      C G A        G     TGTTCCGACAGGAACC
                    C - G
                    G - C
                    A - T
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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