The detailed information of tRNA gene sequence


Sequence ID>WENV180095811
Genome IDMTBK01091027
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 9241
End posion on genome 9168
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cctgaaagat
tRNA gene sequence 
GGGCCTGTAGCGCAGTTGGGAGCGCGCCTCAATCGCACTGAGGAGGTCGAGGGTTCAAAT
CCCTCCAGGTCCACtg
Downstream region at tRNA end position 
cggtgccccg
Secondary structure (Cloverleaf model)
>WENV180095811	Ala	CGC
                   t      ACtg cggtgccccg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    T       C G C G       G A G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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