The detailed information of tRNA gene sequence


Sequence ID>WENV180095826
Genome IDMTBK01091609
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 451
End posion on genome 527
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
caacgacctt
tRNA gene sequence 
GCCGGGGTAGCTCAGCTGGTCAGAGCGCTGGATTGTGGATCCAGAGGTCGACGGTTCAAA
CCCGTCCCCCGGTACCA
Downstream region at tRNA end position 
tgaaaactat
Secondary structure (Cloverleaf model)
>WENV180095826	His	GTG
                   t      ACCA tgaaaactat
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          C A
                    T     C T G C C     A
      C G A        A      | | | | |     A
    T       C T C G       G A C G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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