The detailed information of tRNA gene sequence


Sequence ID>WENV180095829
Genome IDMTBK01091671
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2968
End posion on genome 3043
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cgggcgctgc
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGCGGGTTCAAG
TCCCGCCGGCCCTACCg
Downstream region at tRNA end position 
ccgctcgtcg
Secondary structure (Cloverleaf model)
>WENV180095829	Ile2	CAT
                   c      ACCg ccgctcgtcg
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     G - C          T G
                    T     C G C C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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