The detailed information of tRNA gene sequence


Sequence ID>WENV180095838
Genome IDMTBK01092669
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 15360
End posion on genome 15270
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gggcgcttgc
tRNA gene sequence 
GGAGACGTGGCTGAGCGGCTGAAAGCGGCGGTTTGCTAAATCGTTAAGGGTCAAAAGCCC
TTCACAGGTTCGAATCCTGTCGTCTCCGCCA
Downstream region at tRNA end position 
tcatttgcga
Secondary structure (Cloverleaf model)
>WENV180095838	Ser	GCT
                   c      GCCA tcatttgcga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        G      | | | | |     G
    G       G T C G       A C A G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TAAGGGTCAAAAGCCCTTC
                    G + T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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