The detailed information of tRNA gene sequence


Sequence ID>WENV180095839
Genome IDMTBK01092669
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 131
End posion on genome 45
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tcgctcgcgt
tRNA gene sequence 
GCGGACGTGGCGGAACTGGTAGACGCGCAGGTCTCAGAAGCCTGTGGCCGCAAGGCCGTG
GAAGTTCGATTCTTCTCGTCCGCACCA
Downstream region at tRNA end position 
aataggtctt
Secondary structure (Cloverleaf model)
>WENV180095839	Leu	CAG
                   t      ACCA aataggtctt
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T T
                    T     T C T T C     A
      C A A        G      + | | | |     G
    T       G G C G       G G A A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGCCGCAAGGCCGT
                    C - G
                    A - T
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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