The detailed information of tRNA gene sequence


Sequence ID>WENV180095849
Genome IDMTBK01093578
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 18206
End posion on genome 18131
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttacgttcta
tRNA gene sequence 
GCCCCCGTCGTCTAGCGGCCTAGGACGCCGCCCTCTCACGGCGGTAGCGTGGGTTCGAAT
CCCATCGGGGGTACCA
Downstream region at tRNA end position 
gagtttcgtt
Secondary structure (Cloverleaf model)
>WENV180095849	Glu	CTC
                   a      ACCA gagtttcgtt
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C C C     A
      C G A        C      + | | | |     G
    G       T C T G       G T G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        G     TAGC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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