The detailed information of tRNA gene sequence


Sequence ID>WENV180095859
Genome IDMTBK01094134
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 187
End posion on genome 100
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tggcgcaaat
tRNA gene sequence 
GGAGAGTTGCCAGAGTGGTCGATCGGGGCAGACTCGAAATCTGTTGAACCCTTCGGGGTT
CCGGGGGTTCGAATCCCTCACTCTCCGCat
Downstream region at tRNA end position 
taaaaacggt
Secondary structure (Cloverleaf model)
>WENV180095859	Ser	CGA
                   t      GCat taaaaacggt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C C       G G G G G     C
    G       +   | |                 T T
    T       T C G G
      C G A        G     TGAACCCTTCGGGGTTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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