The detailed information of tRNA gene sequence


Sequence ID>WENV180095861
Genome IDMTBK01094571
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1318
End posion on genome 1242
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
caaagcttat
tRNA gene sequence 
GGGTCTGTAGCTCAGCTGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGATGGTTCGAG
TCCATCCAGACCCACCA
Downstream region at tRNA end position 
gatacacaag
Secondary structure (Cloverleaf model)
>WENV180095861	Ile	GAT
                   t      ACCA gatacacaag
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     C T A C C     A
      C G A        A      | | | | |     G
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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