The detailed information of tRNA gene sequence


Sequence ID>WENV180095869
Genome IDMTBK01094767
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1261
End posion on genome 1187
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agttggagtt
tRNA gene sequence 
GCCTCGGTAGCTCAAATGGATAGAGCCATGGCTTGCTAATCCATTGGTTGTGAGTTCGAG
TCTCACCCGGGGCACtc
Downstream region at tRNA end position 
tcttgctttt
Secondary structure (Cloverleaf model)
>WENV180095869	Ser	GCT
                   t      ACtc tcttgctttt
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T G
                    T     C A C T C     A
      A A A        A      | | | | |     G
    T       C T C G       G T G A G     C
    G       | | | |                 T T
    G       G A G C
      A T A        C     TGGTT
                    A - T
                    T - A
                    G - C
                    G - C
                    C   T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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