The detailed information of tRNA gene sequence


Sequence ID>WENV180095874
Genome IDMTBK01094996
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 300
End posion on genome 206
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgctttgcat
tRNA gene sequence 
GGAGAGATGGCTGAGTGGACGAAGGCGCTCGCCTGGAAAGCGAGTAGATGGGGCAAAACC
TCGTCTCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
taggctttgg
Secondary structure (Cloverleaf model)
>WENV180095874	Ser	GGA
                   t      GCCA taggctttgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    A       A G G C
      C G A        G     TAGATGGGGCAAAACCTCGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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