The detailed information of tRNA gene sequence


Sequence ID>WENV180095879
Genome IDMTBK01095470
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1344
End posion on genome 1253
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
aggtgttctT
tRNA gene sequence 
GTCCCGATGGGGTAGTGGATATCCCGGAGGCCTGCGGAGCATTTTTCGCGCAGAGAGCCT
TCAACCCGGGTTCGAATCCCGGTCGGGACGTga
Downstream region at tRNA end position 
tatttatcct
Secondary structure (Cloverleaf model)
>WENV180095879	Arg	GCG
                   T      GTga tatttatcct
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       T G G G       C C G G G     C
    G         | | |                 T T
    A       T C C C
      T A          G     TTTCGCGCAGAGAGCCTTCAAC
                    G + T
                    A - T
                    G   A
                    G - C
                    C - G
                  C       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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