The detailed information of tRNA gene sequence


Sequence ID>WENV180095880
Genome IDMTBK01095493
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 154
End posion on genome 69
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaccagttgt
tRNA gene sequence 
GGAGGATTAGTCCTAATTGGTAAGGCAGCGGTCTTGAAAACCGCCGGGTTCTGCCCTTGG
GGGTTCGAATCCCTCATCCTCCGCCA
Downstream region at tRNA end position 
caaccatagt
Secondary structure (Cloverleaf model)
>WENV180095880	Ser	TGA
                   t      GCCA caaccatagt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C C T G       G G G G G     C
    T         | + |                 T T
    G       A G G C
      G T A        A     CGGGTTCTGCCCTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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