The detailed information of tRNA gene sequence


Sequence ID>WENV180095881
Genome IDMTBK01095516
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 44
End posion on genome 118
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtcacctgat
tRNA gene sequence 
AGGGGAGTGGCTCAATGGTAGAGCAACGGTCTCCAAAACCGTGGGTTGCGGGTTCGAATC
CTGTCTCCCCTGCCA
Downstream region at tRNA end position 
gatgagggcc
Secondary structure (Cloverleaf model)
>WENV180095881	Trp	CCA
                   t      GCCA gatgagggcc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
        A A        G      + | + | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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