The detailed information of tRNA gene sequence


Sequence ID>WENV180095884
Genome IDMTBK01095772
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 246
End posion on genome 152
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acaggagagc
tRNA gene sequence 
GGAGAGATACCGAAGTGGTCATAACGGGACCGACTCGAAATCGGTTTGAGGGCCTAACAG
CTCTCACGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
ttattttctt
Secondary structure (Cloverleaf model)
>WENV180095884	Ser	CGA
                   c      GCCA ttattttctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G G G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TTGAGGGCCTAACAGCTCTCAC
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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