The detailed information of tRNA gene sequence


Sequence ID>WENV180095887
Genome IDMTBK01096169
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 675
End posion on genome 599
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctgtggttat
tRNA gene sequence 
GGCGGCATAGCTCAGTTGGTCAGAGCGTCCGGTTCATACCCGGCAGGTCGTAGGTTCGAA
TCCCACTGCCGCTACCA
Downstream region at tRNA end position 
tgcggcccgt
Secondary structure (Cloverleaf model)
>WENV180095887	Met	CAT
                   t      ACCA tgcggcccgt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     C A C C C     A
      T G A        A      | |   | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    T   C
                    C - G
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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