The detailed information of tRNA gene sequence


Sequence ID>WENV180095892
Genome IDMTBK01096219
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 222
End posion on genome 147
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attaatttgc
tRNA gene sequence 
AGGTCCGTAGCTCTAACGGGAGAGCACCGGACTCCAAATCCGGGGGTTGCAGGTTCAAAT
CCTGCCGGGCCTGCCA
Downstream region at tRNA end position 
tatatcttaa
Secondary structure (Cloverleaf model)
>WENV180095892	Trp	CCA
                   c      GCCA tatatcttaa
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      A A T        A      | | | | |     A
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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