The detailed information of tRNA gene sequence


Sequence ID>WENV180095894
Genome IDMTBK01096500
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2803
End posion on genome 2717
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
catggccgac
tRNA gene sequence 
GGAGGATTCGCCTAGTGGCCTATGGCGCTCGCCTGGAACGCGGGTTGGGTTAATAGCCCT
CGCGGGTTCAAATCCCGCATCCTCCGCgc
Downstream region at tRNA end position 
ccgtccgggg
Secondary structure (Cloverleaf model)
>WENV180095894	Ser	GGA
                   c      GCgc ccgtccgggg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C G C C C     A
      T G A        C      | | | | |     A
    G       T C C G       G C G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGGTTAATAGCCCTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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