The detailed information of tRNA gene sequence


Sequence ID>WENV180095902
Genome IDMTBK01096861
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 983
End posion on genome 890
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tacttggtgc
tRNA gene sequence 
GGAGATGTGTCCGAGCTGGCTGAAGGAGCACGATTGGAAATCGTGTGTACGTGCAAAACG
CGTACCTTGGGTTCGAATCCCAACATCTCCGCCA
Downstream region at tRNA end position 
ttttttttct
Secondary structure (Cloverleaf model)
>WENV180095902	Ser	GGA
                   c      GCCA ttttttttct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     A A C C C     A
    T C G A        G      | | | | |     G
  G         G C C T       T T G G G     C
  G           | | |                 T T
  C         A G G A
    T G A          G     TGTACGTGCAAAACGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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