The detailed information of tRNA gene sequence


Sequence ID>WENV180095935
Genome IDMTBK01099241
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3917
End posion on genome 3830
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gctttgcggc
tRNA gene sequence 
GGTGGCGTGGCAGAGCGGCCTAATGCACTCGCCTTGAAAGCGAGAGACGGCTAACACCGT
CCGGGGGTTCAAATCCCTCCGCCACCGCtc
Downstream region at tRNA end position 
tggcggtggc
Secondary structure (Cloverleaf model)
>WENV180095935	Ser	TGA
                   c      GCtc tggcggtggc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     A
    G       G A C G       G G G G G     C
    G         | | |                 T T
    C       A T G C
      C T A        A     AGACGGCTAACACCGTCC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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