The detailed information of tRNA gene sequence


Sequence ID>WENV180095936
Genome IDMTBK01099241
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1794
End posion on genome 1704
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgacggttca
tRNA gene sequence 
GGAGGCGTGCCAGAGCGGCCGAATGGGACTCACTGCTAATGAGTTGTCCCCCTTAAAGGG
GACCGGAGGTTCAAATCCTCTCGCCTCCGCCg
Downstream region at tRNA end position 
cggtcggact
Secondary structure (Cloverleaf model)
>WENV180095936	Ser	GCT
                   a      GCCg cggtcggact
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        G      + | | | |     A
    G       G A C C       G G A G G     C
    G         | | |                 T T
    C       A T G G
      C G A        G     TGTCCCCCTTAAAGGGGACC
                    A - T
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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