The detailed information of tRNA gene sequence


Sequence ID>WENV180095939
Genome IDMTBK01099307
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 136
End posion on genome 47
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gggtacacca
tRNA gene sequence 
GGAGAGATGCCTGAGCGGTCGAAAGGACACGCTTGGAGAGCGTGCGTATGAGAAATCGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
gttattatct
Secondary structure (Cloverleaf model)
>WENV180095939	Ser	GGA
                   a      GCCA gttattatct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C C       G T G G G     C
    G         | | |                 T T
    T       A A G G
      C G A        A     CGTATGAGAAATCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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