The detailed information of tRNA gene sequence


Sequence ID>WENV180095947
Genome IDMTBK01099458
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 209
End posion on genome 284
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
actttaatat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCACAGGTTCAAGT
CCTGTCTCCGCAACCA
Downstream region at tRNA end position 
tttaaataat
Secondary structure (Cloverleaf model)
>WENV180095947	fMet	CAT
                   t      ACCA tttaaataat
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
      T G A        G      | | | | |     A
    T       C G A G       A C A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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