The detailed information of tRNA gene sequence


Sequence ID>WENV180095969
Genome IDMTBK01100099
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1188
End posion on genome 1278
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggtgatctgc
tRNA gene sequence 
GGAGGAGTGCCCGAGCGGATGAAGGGAGCGGTCTTGAAAATCGCCAGGGTCTTCATGGCC
CTCGTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
tctgttctta
Secondary structure (Cloverleaf model)
>WENV180095969	Ser	TGA
                   c      GCCA tctgttctta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C C       G T G G G     C
    G         | | |                 T T
    A       A G G G
      T G A        A     CAGGGTCTTCATGGCCCTC
                    G - C
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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