The detailed information of tRNA gene sequence


Sequence ID>WENV180095970
Genome IDMTBK01100099
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1681
End posion on genome 1775
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taacctgagc
tRNA gene sequence 
GGAGAGATACCCAAGCTGGCTGAAGGGGAAGGTTTGCTAAACCTTTAGGCGGTGCAACAA
ACCGCGCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
ttttcatttc
Secondary structure (Cloverleaf model)
>WENV180095970	Ser	GCT
                   c      GCCA ttttcatttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
    T C G A        A      | | | | |     G
  G         A C C C       G G G G G     C
  G           | | |                 T T
  C         A G G G
    T G A          G     TAGGCGGTGCAACAAACCGCGC
                    A - T
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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