The detailed information of tRNA gene sequence


Sequence ID>WENV180095983
Genome IDMTBK01100539
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4387
End posion on genome 4311
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atataaacgt
tRNA gene sequence 
CGCGGGGTAGAGCAGACCGGCAGCTCGTTGGGCTCATAACCCAAAGGTCGTGGGTTCAAA
TCCCACCCCCGCTACCA
Downstream region at tRNA end position 
gaagagtgaa
Secondary structure (Cloverleaf model)
>WENV180095983	fMet	CAT
                   t      ACCA gaagagtgaa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        A      | | | | |     A
    C       C G A G       G T G G G     C
    C       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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