The detailed information of tRNA gene sequence


Sequence ID>WENV180095988
Genome IDMTBK01100773
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 25
End posion on genome 116
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagggcgcct
tRNA gene sequence 
GGAGACGTCGCATAGTCCGGCCTAGTGCACCACCCTGCTAAGGTGGAGTCCCCTCACGGG
GACCAGGGGTTCAAATCCCCTCGTCTCCGCCA
Downstream region at tRNA end position 
gaaaaccccg
Secondary structure (Cloverleaf model)
>WENV180095988	Ser	GCT
                   t      GCCA gaaaaccccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T C C C C     A
    C T G A        C      | | | | |     A
  C         T A C G       A G G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        A     AGTCCCCTCACGGGGACC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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