The detailed information of tRNA gene sequence


Sequence ID>WENV180095999
Genome IDMTBK01101675
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1197
End posion on genome 1284
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gataagaaat
tRNA gene sequence 
GGAGAGGTCGCATAGTGGTTTAGTGCGGTTGCTTGGAAAGCAGCTGTGTCCGTAAGGGCA
CCGTGGGTTCGAATCCCACCCTCTCCGCat
Downstream region at tRNA end position 
tatcgtgcta
Secondary structure (Cloverleaf model)
>WENV180095999	Ser	GGA
                   t      GCat tatcgtgcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    T       G T G C
      T T A        G     TGTGTCCGTAAGGGCACC
                    G - C
                    T + G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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