The detailed information of tRNA gene sequence


Sequence ID>WENV180096009
Genome IDMTBK01102497
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 486
End posion on genome 414
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
acaagcattt
tRNA gene sequence 
GCCTCAGTGGCTCAGCCGGTAGAGCGCGTCCTTGGTAAGGACGAGGTCGCGAGTTCAAAT
CTCGCCTGAGGCTtta
Downstream region at tRNA end position 
ctattaaaat
Secondary structure (Cloverleaf model)
>WENV180096009	Thr	GGT
                   t      Ttta ctattaaaat
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          T A
                    T     C G C T C     A
      C G A        G      | | | | |     A
    C       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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